pp siklus nutrien 10

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    BIOGEOCHEMICAL CYCLING

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    All organisms require the six elements :CHNOPS

    Depending on whether the local environmentis aerobic or anaerobic, the exact chemicalform of any of these elements may changequickly and drastically.

    Example: If a soil becomes water logged andanaerobic, sulfate may be converted intohydrogen sulfide and nitrate into nitrogen gas

    or ammonia (via anaerobic respiration). Aswater recedes and the soil becomes aerobicagain, the remaining ammonia is oxidizedback to nitrate in stages.

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    All of this (and many other processes) occurlargely because of the activities of soilmicrobes. Without these microbes, life as weknow it would not occur, because necessaryelements would remain tied up in unusablechemical forms and gradually be removed by

    sedimentation.

    Cycling and transfer of nutrients among allliving organisms :

    biological and chemical processes involved rocks/soil -- atmosphere -- water

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    OXYGEN CYCLE

    Photosynthesis

    Respiration

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    CARBON CYCLE

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    The Chemical Cycles of

    The Carbon Cycle

    Siklus C : alur C antara living organisms

    and the non-living environment.

    Siklus C terdapat di alam sebagai gas(CO2).Di atmospher bumi 0,04% CO2, pd living

    organisme 18% C.

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    C masuk ke dunia biotik oleh peran dari

    autotroph :

    1.Photoautotroph (tanaman dan algae)

    konversi CO2mjd bahan organik selama

    fotosintesis.2. Chemoautotroph(bakteri dan archae)

    oksidasi molekul dalam substrat.

    C kembali ke atm dan air melalui :1. respirasi2. pembakaran3. penguraian (CO2atau CH4)

    The major cycling of C :

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    CO2

    Primary

    producersConsumers

    Organic comp.Via organismsWithin Food chain

    respiration

    Photosinthesis and

    chemosynthesis

    CH4

    Respiration &

    mineralization

    aerobic

    anaerobic

    CO2

    exchange

    Primary

    producersConsumers

    Organic comp. acetatVia organisms

    Within Food chain

    Photosinthesys

    Anaerob

    respiration &

    fermentation

    Methane

    oxidation

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    NITROGEN CYCLE

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    Animal eat plants

    N2

    OrganicN (plants,microrganisms)

    Nitrogen

    fixation

    (symbiotic

    nonsymbiotic

    Organic animal

    NH3

    DecompositionAmmonification

    (microrganisms)

    Chemical fixation

    (Harber-Bosch)

    NO2 Nitrification(Nit rosomonas)

    NO3-

    Nitrification

    (Nitrobacter)

    Denitrification

    (Bacteria)

    SinarMatahari

    Utilization

    of nitrate

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    Key processes :

    Nitrogen fixation: N2--> NH3

    only carried out by certain bacterial genera: Rhizobium(rootnodule symbionts), Azotobacter(free-living soil bacteria),

    others.

    aerobic or anaerobic; ~ 60% on land; 40% in oceans

    Nitrogen fixers :(i) Azotobacter spp.- soil bacteria; occur in oxic environments

    (ii)Klebsiella spp.- soil bacteria, can live in the presence or

    absence of oxygen

    (iii) Cyanobacteria(e.g. Anabeana spp., Nostoc) - water

    bacteria; occur in oxic environments

    (iv) Rhizobium spp.- plant symbionts; responsible forsignificant fixation.

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    Nitrogenase Protection

    How do organisms living in oxic environmentsprotect their nitrogenase from oxygen ?(i) Azotobacter mempunyai laju respirasi sgt

    tinggi.

    (ii) The facultative aerobe Klebsiella mengfiksasi Nhanya jk lingkungan bebas dari O2.

    (iii) Filamentous cyanobacteria mempunyai sel

    heterocysts yg dpt mengfiksasi N, difusi O2lwt sel

    ini rendah.

    (iv) Rhizobia mempunyai leghemoglobin

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    Decomposition / ammonification: organic N

    --> NH4+

    carried out by chemoorganotrophs, both

    aerobes and anaerobes

    some recycled into organic N in soil; some

    into atmosphere excretion of extra nitrogen is often in some

    compound containing -NH2groups, which

    quickly form ammonia (NH3

    ) once they are

    liberated into the environment.

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    Nitrification: NH4+--> nitrite, nitrate

    mostly chemolithotrophs; some

    chemoorganotrophs in acidic areas aerobic conditions; mostly well-drained

    soils at neutral pH

    nitrate leached from soil by rainfall; water

    runoff from fertilized areas can become

    rich in nitrites, dangerous for animal

    health

    inhibitors are sometimes added tofertilizers. E.g., nitrapyrin - inhibits NH3

    -->

    nitrite (1st step); decreases pollution of

    waterways

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    Step of nitrification :

    1. First Step: Ammonium Oxidation

    by ammonia oxidizers (ammonia-oxidizing

    bacteria) : Nitrosomonas, Nitrosospira,

    Nitrosococcus, Nitrosolobus

    Biochemical Oxidation :

    NH4++ 1/2 O2-------> NH2OH + H

    +

    Enzyme: Ammonia Monooxygenase

    NH2OH + O2---------> NO2- + HOH + H+

    Overall Reaction:

    NH2++ 1 1/2 O2----> NO2

    -+ HOH + 2H+.

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    2. Second step: Nitrite OxidationMikroorganisme (nitrate-oxidizing

    bacteria) : Nitrobacter

    Biochemical Oxidation :

    NO2-+ 1/2 O2-----> NO3

    -.

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    Denitrification: nitrate--> N2or NH3

    chemoorganotrophs (anaerobic respiration)

    Reduksi (NO3-) menjadi nitrogen gas atau Norganik.

    NO3- -----> NO2- -----> NO -----> N2O -----> N2gas

    Major Denitrifiers:* Pseudomonas spp.

    * Bacillus spp.

    Assimilatory nitrate reduction: nitrate -->organic nitrogen many organisms can carry this out

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    aerobic

    anaerobic

    NH3

    N2

    CyanobacteriaRhizobium

    Azotobacter

    NO2-

    NH2 Groups of

    proteinNO3

    -

    assimilation

    deamination

    Nit rosomonasNitrification

    Nitrobacter

    assimilation

    NO2- NH2 Groups of

    protein

    assimilation

    deamination

    NO3 &N2O

    N2denitrification

    Pseudomonas,

    other facultatif

    anaerobs

    N Fixation

    Clost r id ium

    pasteur iumPhototrophic

    bacteria

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    PHOSPHOROUS CYCLE

    PO43-

    mineralize

    immobilize

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    H2S

    Organic S

    (Animal)

    Organic S

    (plants &

    microrganisms)

    SO42-

    S0

    H2S oxidation

    (Photosynthetic &

    non photosynthetic

    sulfur bacteria)

    H2S oxidation

    (Photosynthetic &

    non photosynthetic

    sulfur bacteria)

    Decomposition

    (microorganisms

    Animal eat

    plants

    Sinar

    MatahariSulfat reduction bacteria

    Sinar

    Matahar

    i

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    Some major steps in the sulfur cycle include:

    Assimilative reductionof sulfate (SO4=) into -SH

    groups in proteins. Release of -SHto form H2S during excretion,

    decomposition, and desulfurylation.

    Oxidation of H2Sby chemolithotrophsto form

    sulfur (S0) and sulfate (SO4=)

    Dissimilative reductionof sulfate (SO4=) by

    anaerobic respiration of sulfate-reducing bacteria.

    Anaerobic oxidationof H2

    S and S by anoxygenicphototrophic bacteria(purple and green bacteria)

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    SULFUR CYCLE

    Oxidized

    spontan

    eous

    S0

    Oxidized by sulfur

    bacteria